๐ Detection of Middle East respiratory syndrome coronavirus using reverse transcription loop-mediated isothermal amplification (RT-LAMP)
ยฉ 2014 Shirato et al.; licensee Bio. Med Central Ltd. Background: The first documented case of Middle East Respiratory Syndrome coronavirus (MERS-CoV) occurred in 2012, and outbreaks have continued ever since, mainly in Saudi Arabia. MERS-CoV is primarily diagnosed using a real-time RT-PCR assay, with at least two different genomic targets required for a positive diagnosis according to the case definition of The World Health Organization (WHO) as of 3 July 2013. Therefore, it is urgently necessary to develop as many specific genetic diagnostic methods as possible to allow stable diagnosis of MERS-CoV infections. Methods. Reverse transcription-loop-mediated isothermal amplification (RT-LAMP) is a genetic diagnostic method used widely for the detection of viral pathogens, which requires only a single temperature for amplification, and can be completed in less than 1 h. This study developed a novel RT-LAMP assay for detecting MERS-CoV using primer sets targeting a conserved nucleocapsid protein region. Results: The RT-LAMP assay was capable of detecting as few as 3.4 copies of MERS-CoV RNA, and was highly specific, with no cross-reaction to other respiratory viruses. Pilot experiments to detect MERS-CoV from medium containing pharyngeal swabs inoculated with pre-titrated viruses were also performed. The RT-LAMP assay exhibited sensitivity similar to that of MERS-CoV real-time RT-PCR. Conclusions: These results suggest that the RT-LAMP assay described here is a useful tool for the diagnosis and epidemiologic surveillance of human MERS-CoV infections.
keywords
๐ isothermal amplification (14)
๐ nucleocapsid protein (162)
๐ results suggest (206)
author
๐ค Shirato, Kazuya
๐ค Yano, Takuya
๐ค Senba, Syouhei
๐ค Akachi, Shigehiro
๐ค Kobayashi, Takashi
๐ค Nishinaka, Takamichi
๐ค Notomi, Tsugunori
๐ค Matsuyama, Shutoku
year
โฐ 2014
journal
๐ Virology Journal
issn
๐ 1743422X
volume
11
number
1
page
citedbycount
35
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