🔗 Codon usage

Articles (17)

• Comparative study of synonymous codon usage variations between the nucleocapsid and spike genes of coronavirus, and C-type lectin domain genes of human and mouse

  👤 Ahn, Insung 👤 Jeong, Byeong Jin 👤 Hyeon, Seok Son ⏰ 2009 📚 Experimental and Molecular Medicine

• On the biased nucleotide composition of the human coronavirus RNA genome

  👤 Berkhout, Ben 👤 van Hemert, Formijn ⏰ 2015 📚 Virus Research

• Sequencing of coronavirus IBV genomic RNA: Three open reading frames in the 5' 'unique' region of mRNA D

  👤 Boursnell, M. E.G. 👤 Binns, M. M. 👤 Brown, T. D.K. ⏰ 1985 📚 Journal of General Virology

• Avian coronavirus spike glycoprotein ectodomain shows a low codon adaptation to Gallus gallus with virus-exclusive codons in strategic amino acids positions

  👤 Brandão, Paulo E. ⏰ 2012 📚 Journal of Molecular Evolution

• The evolution of codon usage in structural and non-structural viral genes: The case of Avian coronavirus and its natural host Gallus gallus

  👤 Brandão, Paulo Eduardo ⏰ 2013 📚 Virus Research

• Could human coronavirus OC43 have co-evolved with early humans?

  👤 Brandão, Paulo Eduardo ⏰ 2018 📚 Genetics and Molecular Biology

• Genome-wide analysis of codon usage bias in Bovine Coronavirus

  👤 Castells, Matías 👤 Victoria, Matías 👤 Colina, Rodney 👤 Musto, Héctor 👤 Cristina, Juan ⏰ 2017 📚 Virology Journal

• Analysis of synonymous codon usage in SARS Coronavirus and other viruses in the Nidovirales

  👤 Gu, Wanjun 👤 Zhou, Tong 👤 Ma, Jianmin 👤 Sun, Xiao 👤 Lu, Zuhong ⏰ 2004 📚 Virus Research

• Comprehensive codon usage analysis of porcine deltacoronavirus

  👤 He, Wei 👤 Wang, Ningning 👤 Tan, Jimin 👤 Wang, Ruyi 👤 Yang, Yichen 👤 Li, Gairu 👤 Guan, Haifei 👤 Zheng, Yuna 👤 Shi, Xinze 👤 Ye, Rui 👤 Su, Shuo 👤 Zhou, Jiyong ⏰ 2019 📚 Molecular Phylogenetics and Evolution

• Cross-species transmission of the newly identified coronavirus 2019-nCoV.

  👤 Ji, Wei 👤 Wang, Wei 👤 Zhao, Xiaofang 👤 Zai, Junjie 👤 Li, Xingguang ⏰ 2020 📚 J Med Virol

• From SARS and MERS CoVs to SARS-CoV-2: Moving toward more biased codon usage in viral structural and nonstructural genes.

  👤 Kandeel, Mahmoud 👤 Ibrahim, Abdelazim 👤 Fayez, Mahmoud 👤 Al-Nazawi, Mohammed ⏰ 2020 📚 J Med Virol

• Genome structure and transcriptional regulation of human coronavirus NL63

  👤 Pyrc, Krzysztof 👤 Jebbink, Maarten F. 👤 Berkhout, Ben 👤 Van Der Hoek, Lia ⏰ 2004 📚 Virology Journal

• Analysis of preferred codon usage in the coronavirus N genes and their implications for genome evolution and vaccine design

  👤 Sheikh, Abdullah 👤 Al-Taher, Abdulla 👤 Al-Nazawi, Mohammed 👤 Al-Mubarak, Abdullah I. 👤 Kandeel, Mahmoud ⏰ 2020 📚 Journal of Virological Methods

• Phylogenetic and recombination analysis of coronavirus HKU1, a novel coronavirus from patients with pneumonia

  👤 Woo, P. C.Y. 👤 Lau, S. K.P. 👤 Huang, Y. 👤 Tsoi, H. W. 👤 Chan, K. H. 👤 Yuen, K. Y. ⏰ 2005 📚 Archives of Virology

• Coronavirus genomics and bioinformatics analysis

  👤 Woo, Patrick C.Y. 👤 Huang, Yi 👤 Lau, Susanna K.P. 👤 Yuen, Kwok Yung ⏰ 2010 📚 Viruses

• More and more coronaviruses: Human coronavirus HKU1

  👤 Woo, Patrick C.Y. 👤 Lau, Susanna K.P. 👤 Yip, Cyril C.Y. 👤 Huang, Yi 👤 Yuen, Kwok Yung ⏰ 2009 📚 Viruses

• Cytosine deamination and selection of CpG suppressed clones are the two major independent biological forces that shape codon usage bias in coronaviruses

  👤 Woo, Patrick C.Y. 👤 Wong, Beatrice H.L. 👤 Huang, Yi 👤 Lau, Susanna K.P. 👤 Yuen, Kwok Yung ⏰ 2007 📚 Virology